BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022G06SP1|AL427949
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig703 1168 0.0
>3x_Contig703
Length = 2482
Score = 1168 bits (588), Expect = 0.0
Identities = 605/610 (99%), Gaps = 2/610 (0%)
Strand = Plus / Minus
Query: 406 tacaacatggattatcctccgggcagtgagaatcttcactgcaggtggttgtctcatcag 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 tacaacatggattatcctccgggcagtgagaatcttcactgcaggtggttgtctcatcag 2422
Query: 466 cagctgaaacaactttcaatgcaacagccgctagggccaacactttagcaaacgatctca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 cagctgaaacaactttcaatgcaacagccgctagggccaacactttagcaaacgatctca 2362
Query: 526 ttacaaaagtatattatttataggcgtgggaggagcttggctctcttatgttaccttgaa 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 ttacaaaagtatattatttataggcgtgggaggagcttggctctcttatgttaccttgaa 2302
Query: 586 tcttagattctatttataactgaaagaatgcaacaagagataccttggacttttttgaat 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 tcttagattctatttataactgaaagaatgcaacaagagataccttggacttttttgaat 2242
Query: 646 gggttttcattcaaattttatatccttatatatataaakkcatatatcgatatacaggta 705
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2241 gggttttcattcaaattttatatccttatatatataaattcatatatcgatatacaggta 2182
Query: 706 catatagtttcttgccgggctgccgtaatagcacactaagcctgttcctaagaagaagct 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 catatagtttcttgccgggctgccgtaatagcacactaagcctgttcctaagaagaagct 2122
Query: 766 gtactatctcctctgtttattccacctttcgcagaatg-gcctcgagaaatttcggttga 824
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2121 gtactatctcctctgtttattccacctttcgcagaatgcgcctcgagaaatttcggttga 2062
Query: 825 gaattttttcagcaattacccaattggggcaaaagcgatgtttaaaaaaaggcgtcaaag 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 gaattttttcagcaattacccaattggggcaaaagcgatgtttaaaaaaaggcgtcaaag 2002
Query: 885 aggaagcatttttcgtagctttccaacaacacatcacagagcttggagttgagtacgca- 943
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2001 aggaagcatttttcgtagctttccaacaacacatcacagagcttggagttgagtacgcag 1942
Query: 944 ttcttggccgttctccccgcaacaaatggcgcagatatctatgcaaataaacttgtgawt 1003
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1941 ttcttggccgttctccccgcaacaaatggcgcagatatctatgcaaataaacttgtgatt 1882
Query: 1004 gtttcttagg 1013
||||||||||
Sbjct: 1881 gtttcttagg 1872
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7533
Number of Sequences: 1807
Number of extensions: 7533
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)